Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_001550055_01923 | GCA_001550055_01942 | GCA_001550055_01923 | GCA_001550055_01942 | Unannotated protein. | Unannotated protein; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. | 0.912 |
GCA_001550055_01923 | GCA_001550055_01943 | GCA_001550055_01923 | GCA_001550055_01943 | Unannotated protein. | Unannotated protein; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. | 0.961 |
GCA_001550055_01923 | GCA_001550055_01944 | GCA_001550055_01923 | GCA_001550055_01944 | Unannotated protein. | Unannotated protein. | 0.877 |
GCA_001550055_01923 | GCA_001550055_01945 | GCA_001550055_01923 | GCA_001550055_01945 | Unannotated protein. | Unannotated protein. | 0.902 |
GCA_001550055_01923 | GCA_001550055_03412 | GCA_001550055_01923 | GCA_001550055_03412 | Unannotated protein. | Unannotated protein; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | 0.773 |
GCA_001550055_01923 | GCA_001550055_03530 | GCA_001550055_01923 | GCA_001550055_03530 | Unannotated protein. | Unannotated protein. | 0.610 |
GCA_001550055_01923 | GCA_001550055_03534 | GCA_001550055_01923 | GCA_001550055_03534 | Unannotated protein. | Unannotated protein; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | 0.681 |
GCA_001550055_01923 | GCA_001550055_03535 | GCA_001550055_01923 | GCA_001550055_03535 | Unannotated protein. | Unannotated protein; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.680 |
GCA_001550055_01923 | sucC | GCA_001550055_01923 | GCA_001550055_01925 | Unannotated protein. | Unannotated protein; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.994 |
GCA_001550055_01923 | sucD | GCA_001550055_01923 | GCA_001550055_01924 | Unannotated protein. | Unannotated protein; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.990 |
GCA_001550055_01942 | GCA_001550055_01923 | GCA_001550055_01942 | GCA_001550055_01923 | Unannotated protein; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. | Unannotated protein. | 0.912 |
GCA_001550055_01942 | GCA_001550055_01943 | GCA_001550055_01942 | GCA_001550055_01943 | Unannotated protein; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. | Unannotated protein; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. | 0.999 |
GCA_001550055_01942 | GCA_001550055_01944 | GCA_001550055_01942 | GCA_001550055_01944 | Unannotated protein; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. | Unannotated protein. | 0.999 |
GCA_001550055_01942 | GCA_001550055_01945 | GCA_001550055_01942 | GCA_001550055_01945 | Unannotated protein; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. | Unannotated protein. | 0.999 |
GCA_001550055_01942 | GCA_001550055_03412 | GCA_001550055_01942 | GCA_001550055_03412 | Unannotated protein; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. | Unannotated protein; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | 0.977 |
GCA_001550055_01942 | GCA_001550055_03530 | GCA_001550055_01942 | GCA_001550055_03530 | Unannotated protein; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. | Unannotated protein. | 0.944 |
GCA_001550055_01942 | GCA_001550055_03534 | GCA_001550055_01942 | GCA_001550055_03534 | Unannotated protein; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. | Unannotated protein; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | 0.892 |
GCA_001550055_01942 | GCA_001550055_03535 | GCA_001550055_01942 | GCA_001550055_03535 | Unannotated protein; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. | Unannotated protein; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.897 |
GCA_001550055_01942 | sucC | GCA_001550055_01942 | GCA_001550055_01925 | Unannotated protein; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. | Unannotated protein; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.963 |
GCA_001550055_01942 | sucD | GCA_001550055_01942 | GCA_001550055_01924 | Unannotated protein; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. | Unannotated protein; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.971 |
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