STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001550055_02334Unannotated protein. (259 aa)    
Predicted Functional Partners:
GCA_001550055_02335
Unannotated protein.
 
     0.764
GCA_001550055_03130
Unannotated protein.
  
  
 0.704
GCA_001550055_03075
Unannotated protein.
  
  
 0.623
GCA_001550055_00970
Unannotated protein.
    
  0.582
GCA_001550055_03247
Unannotated protein.
    
  0.573
GCA_001550055_01755
Unannotated protein.
  
  
 0.530
GCA_001550055_01378
Unannotated protein; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
  
 0.503
GCA_001550055_03496
Unannotated protein.
  
  
 0.503
GCA_001550055_01699
Unannotated protein; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
  
  0.487
GCA_001550055_02441
Unannotated protein.
    
 0.485
Your Current Organism:
Kordiimonas lacus
NCBI taxonomy Id: 637679
Other names: CGMCC 1.9109, JCM 16261, K. lacus, Kordiimonas lacus Xu et al. 2011 emend. Wu et al. 2016, Kordiimonas lacus Xu et al. 2011 emend. Yang et al. 2013, Kordiimonas sp. S3-22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.