Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SVI_0907 | SVI_0908 | SVI_0907 | SVI_0908 | Proton-dependent oligopeptide transporter family protein. | Conserved hypothetical protein. | 0.420 |
SVI_0907 | SVI_0909 | SVI_0907 | SVI_0909 | Proton-dependent oligopeptide transporter family protein. | Conserved hypothetical protein. | 0.426 |
SVI_0907 | SVI_0910 | SVI_0907 | SVI_0910 | Proton-dependent oligopeptide transporter family protein. | Conserved hypothetical protein. | 0.420 |
SVI_0908 | SVI_0907 | SVI_0908 | SVI_0907 | Conserved hypothetical protein. | Proton-dependent oligopeptide transporter family protein. | 0.420 |
SVI_0908 | SVI_0909 | SVI_0908 | SVI_0909 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.784 |
SVI_0908 | SVI_0910 | SVI_0908 | SVI_0910 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.784 |
SVI_0908 | SVI_0911 | SVI_0908 | SVI_0911 | Conserved hypothetical protein. | CobD-related protein. | 0.720 |
SVI_0908 | SVI_3501 | SVI_0908 | SVI_3501 | Conserved hypothetical protein. | Glutathione S-transferase family protein. | 0.552 |
SVI_0908 | pfs | SVI_0908 | SVI_0912 | Conserved hypothetical protein. | 5-methylthioadenosine nucleosidase/S-adenosylhomocysteine nucleosidase; Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'- methylthioribose and S-ribosylhomocysteine, respectively. Belongs to the PNP/UDP phosphorylase family. MtnN subfamily. | 0.484 |
SVI_0909 | SVI_0907 | SVI_0909 | SVI_0907 | Conserved hypothetical protein. | Proton-dependent oligopeptide transporter family protein. | 0.426 |
SVI_0909 | SVI_0908 | SVI_0909 | SVI_0908 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.784 |
SVI_0909 | SVI_0910 | SVI_0909 | SVI_0910 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.784 |
SVI_0909 | SVI_0911 | SVI_0909 | SVI_0911 | Conserved hypothetical protein. | CobD-related protein. | 0.728 |
SVI_0909 | pfs | SVI_0909 | SVI_0912 | Conserved hypothetical protein. | 5-methylthioadenosine nucleosidase/S-adenosylhomocysteine nucleosidase; Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'- methylthioribose and S-ribosylhomocysteine, respectively. Belongs to the PNP/UDP phosphorylase family. MtnN subfamily. | 0.523 |
SVI_0910 | SVI_0907 | SVI_0910 | SVI_0907 | Conserved hypothetical protein. | Proton-dependent oligopeptide transporter family protein. | 0.420 |
SVI_0910 | SVI_0908 | SVI_0910 | SVI_0908 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.784 |
SVI_0910 | SVI_0909 | SVI_0910 | SVI_0909 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.784 |
SVI_0910 | SVI_0911 | SVI_0910 | SVI_0911 | Conserved hypothetical protein. | CobD-related protein. | 0.728 |
SVI_0910 | pfs | SVI_0910 | SVI_0912 | Conserved hypothetical protein. | 5-methylthioadenosine nucleosidase/S-adenosylhomocysteine nucleosidase; Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'- methylthioribose and S-ribosylhomocysteine, respectively. Belongs to the PNP/UDP phosphorylase family. MtnN subfamily. | 0.490 |
SVI_0911 | SVI_0908 | SVI_0911 | SVI_0908 | CobD-related protein. | Conserved hypothetical protein. | 0.720 |
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