Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene co-occurrence
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[Homology]
Score
napDnapD protein; Chaperone for NapA, the catalytic subunit of the periplasmic nitrate reductase. It binds directly and specifically to the twin- arginine signal peptide of NapA, preventing premature interaction with the Tat translocase and premature export. (112 aa)    
Predicted Functional Partners:
napA
Periplasmic nitrate reductase; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite.
 
 
 0.998
napB
Cytochrome c-type protein NapB; Electron transfer subunit of the periplasmic nitrate reductase complex NapAB; Belongs to the NapB family.
 
  
 0.994
napC
Periplasmic nitrate reductase, cytochrome c-type protein.
 
  
 0.977
napF
Ferredoxin-type protein NapF; Could be involved in the maturation of NapA, the catalytic subunit of the periplasmic nitrate reductase, before its export into the periplasm; Belongs to the NapF family.
 
  
 0.960
torA
trimethylamine-N-oxide reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.862
torC
Tetraheme cytochrome c; Belongs to the TorC/TorY family.
 
  
 0.843
SVI_2421
Hypothetical protein.
       0.747
SVI_2712
Hypothetical protein.
 
  
 0.593
SVI_1091
Conserved hypothetical protein; Belongs to the UPF0267 family.
  
     0.577
rpmE
Ribosomal protein L31; Binds the 23S rRNA.
      
 0.562
Your Current Organism:
Shewanella violacea
NCBI taxonomy Id: 637905
Other names: S. violacea DSS12, Shewanella violacea DSS12, Shewanella violacea JCM 10179, Shewanella violacea str. DSS12, Shewanella violacea strain DSS12
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