STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SVI_4095Conserved hypothetical protein. (454 aa)    
Predicted Functional Partners:
SVI_4096
Thioester dehydrase family protein.
   
 0.975
SVI_4097
Glycosyl transferase, group 2 family protein.
 
   
 0.957
acpP-2
Acyl carrier protein, putative; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
 
   
 0.954
SVI_4092
Acyl carrier protein, putative.
 
   
 0.953
SVI_4094
Membrane protein, putative.
 
     0.952
SVI_4101
Membrane protein, putative.
 
     0.952
SVI_4102
FAD-binding protein.
 
   
 0.952
SVI_4091
Acyltransferase family protein.
 
   
 0.951
SVI_4099
Thioesterase superfamily.
 
  
 0.951
SVI_4100
Conserved hypothetical protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
 
     0.951
Your Current Organism:
Shewanella violacea
NCBI taxonomy Id: 637905
Other names: S. violacea DSS12, Shewanella violacea DSS12, Shewanella violacea JCM 10179, Shewanella violacea str. DSS12, Shewanella violacea strain DSS12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.