Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ROD_14651 | mdtI | ROD_14651 | ROD_14661 | Conserved hypothetical protein. | Multidrug resistance protein; Catalyzes the excretion of spermidine. | 0.512 |
ROD_14651 | mdtJ | ROD_14651 | ROD_14652 | Conserved hypothetical protein. | Multidrug efflux system protein MdtJ; Catalyzes the excretion of spermidine. | 0.512 |
ROD_14651 | tqsA | ROD_14651 | ROD_14641 | Conserved hypothetical protein. | AI-2 transport protein TqsA. | 0.530 |
mdtI | ROD_14651 | ROD_14661 | ROD_14651 | Multidrug resistance protein; Catalyzes the excretion of spermidine. | Conserved hypothetical protein. | 0.512 |
mdtI | mdtJ | ROD_14661 | ROD_14652 | Multidrug resistance protein; Catalyzes the excretion of spermidine. | Multidrug efflux system protein MdtJ; Catalyzes the excretion of spermidine. | 0.993 |
mdtI | tqsA | ROD_14661 | ROD_14641 | Multidrug resistance protein; Catalyzes the excretion of spermidine. | AI-2 transport protein TqsA. | 0.417 |
mdtJ | ROD_14651 | ROD_14652 | ROD_14651 | Multidrug efflux system protein MdtJ; Catalyzes the excretion of spermidine. | Conserved hypothetical protein. | 0.512 |
mdtJ | mdtI | ROD_14652 | ROD_14661 | Multidrug efflux system protein MdtJ; Catalyzes the excretion of spermidine. | Multidrug resistance protein; Catalyzes the excretion of spermidine. | 0.993 |
mdtJ | tqsA | ROD_14652 | ROD_14641 | Multidrug efflux system protein MdtJ; Catalyzes the excretion of spermidine. | AI-2 transport protein TqsA. | 0.407 |
tqsA | ROD_14651 | ROD_14641 | ROD_14651 | AI-2 transport protein TqsA. | Conserved hypothetical protein. | 0.530 |
tqsA | mdtI | ROD_14641 | ROD_14661 | AI-2 transport protein TqsA. | Multidrug resistance protein; Catalyzes the excretion of spermidine. | 0.417 |
tqsA | mdtJ | ROD_14641 | ROD_14652 | AI-2 transport protein TqsA. | Multidrug efflux system protein MdtJ; Catalyzes the excretion of spermidine. | 0.407 |