Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ROD_07681 | ROD_14951 | ROD_07681 | ROD_14951 | acyl-CoA thioester hydrolase. | Putative exported protein. | 0.404 |
ROD_07681 | ROD_15841 | ROD_07681 | ROD_15841 | acyl-CoA thioester hydrolase. | Putative outer membrane protein. | 0.640 |
ROD_07681 | ROD_16061 | ROD_07681 | ROD_16061 | acyl-CoA thioester hydrolase. | Putative transferase. | 0.774 |
ROD_07681 | damX | ROD_07681 | ROD_44351 | acyl-CoA thioester hydrolase. | DamX protein; Non-essential cell division protein. | 0.492 |
ROD_14951 | ROD_07681 | ROD_14951 | ROD_07681 | Putative exported protein. | acyl-CoA thioester hydrolase. | 0.404 |
ROD_14951 | ROD_15841 | ROD_14951 | ROD_15841 | Putative exported protein. | Putative outer membrane protein. | 0.689 |
ROD_14951 | ROD_16061 | ROD_14951 | ROD_16061 | Putative exported protein. | Putative transferase. | 0.654 |
ROD_14951 | ROD_24141 | ROD_14951 | ROD_24141 | Putative exported protein. | Putative exported protein. | 0.656 |
ROD_14951 | damX | ROD_14951 | ROD_44351 | Putative exported protein. | DamX protein; Non-essential cell division protein. | 0.710 |
ROD_15821 | ROD_15831 | ROD_15821 | ROD_15831 | Putative DNA-binding protein. | Putative acetyltransferase. | 0.662 |
ROD_15821 | ROD_15841 | ROD_15821 | ROD_15841 | Putative DNA-binding protein. | Putative outer membrane protein. | 0.709 |
ROD_15831 | ROD_15821 | ROD_15831 | ROD_15821 | Putative acetyltransferase. | Putative DNA-binding protein. | 0.662 |
ROD_15831 | ROD_15841 | ROD_15831 | ROD_15841 | Putative acetyltransferase. | Putative outer membrane protein. | 0.829 |
ROD_15841 | ROD_07681 | ROD_15841 | ROD_07681 | Putative outer membrane protein. | acyl-CoA thioester hydrolase. | 0.640 |
ROD_15841 | ROD_14951 | ROD_15841 | ROD_14951 | Putative outer membrane protein. | Putative exported protein. | 0.689 |
ROD_15841 | ROD_15821 | ROD_15841 | ROD_15821 | Putative outer membrane protein. | Putative DNA-binding protein. | 0.709 |
ROD_15841 | ROD_15831 | ROD_15841 | ROD_15831 | Putative outer membrane protein. | Putative acetyltransferase. | 0.829 |
ROD_15841 | ROD_16061 | ROD_15841 | ROD_16061 | Putative outer membrane protein. | Putative transferase. | 0.752 |
ROD_15841 | ROD_24141 | ROD_15841 | ROD_24141 | Putative outer membrane protein. | Putative exported protein. | 0.662 |
ROD_15841 | damX | ROD_15841 | ROD_44351 | Putative outer membrane protein. | DamX protein; Non-essential cell division protein. | 0.661 |
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