STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROD_19191Conserved hypothetical protein. (188 aa)    
Predicted Functional Partners:
cutC
Copper homeostasis protein; Participates in the control of copper homeostasis. Belongs to the CutC family.
     
 0.805
ROD_07291
Putative exported protein.
  
     0.770
ROD_32601
Putative exported protein.
  
    0.762
smp
Putative exported protein.
  
     0.737
uspB
Universal stress protein B.
  
     0.736
nlpB
Lipoprotein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
     0.732
ROD_37811
Putative outer membrane protein.
  
     0.732
yjbO
Putative outer membrane protein.
  
     0.723
atpI
ATP synthase protein I.
  
   
 0.717
ROD_08591
Conserved hypothetical protein.
  
     0.706
Your Current Organism:
Citrobacter rodentium
NCBI taxonomy Id: 637910
Other names: C. rodentium ICC168, Citrobacter rodentium ICC168, Citrobacter rodentium str. ICC168, Citrobacter rodentium strain ICC168
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.