Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
galRGalactose operon repressor. (342 aa)    
Predicted Functional Partners:
ROD_32791
Putative transcriptional regulator.
  
     0.773
gltB
Glutamate synthase [NADPH] large subunit.
    
 
 0.619
galT
Galactose-1-phosphate uridylyltransferase.
 
   
 0.600
fryA
Multiphosphoryl transfer protein 1 [includes phosphoenolpyruvate-protein phosphotransferase; phosphocarrier protein Hp; fructose-like phosphotransferase enzyme IIA component]; Belongs to the PEP-utilizing enzyme family.
   
 
 0.524
ptsA
Multiphosphoryl transfer protein 2.
   
 
 0.524
zwf
Glucose 6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.
   
 
 0.509
hexR
Putative hex-regulon repressor (RpiR-family transcriptional regulator).
   
  
 0.506
galS
Mgl repressor and galactose ultrainduction factor.
    
 
 0.453
pckA
Phosphoenolpyruvate carboxykinase [ATP]; Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA. Belongs to the phosphoenolpyruvate carboxykinase (ATP) family.
      
 0.451
araE
Arabinose-proton symporter; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
      
 0.448
Your Current Organism:
Citrobacter rodentium
NCBI taxonomy Id: 637910
Other names: C. rodentium ICC168, Citrobacter rodentium ICC168, Citrobacter rodentium str. ICC168, Citrobacter rodentium strain ICC168
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