STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U-2Phage tail protein. (164 aa)    
Predicted Functional Partners:
T-2
Putative phage tail tape measure protein.
 
    0.983
X
Putative phage tail protein.
 
 
 0.977
fI-2
Phage tail sheath protein.
 
   0.975
fII-2
Phage tail tube protein.
 
   0.974
J
Phage baseplate assembly protein J.
 
 
 0.969
W
Phage baseplate assembly protein W.
 
 
 0.968
D-2
Phage tail protein.
 
  
 0.966
I
Phage tail protein.
 
 
 0.964
V
Phage tail spike protein.
 
  
 0.954
R
Phage tail completion protein R.
 
    0.953
Your Current Organism:
Citrobacter rodentium
NCBI taxonomy Id: 637910
Other names: C. rodentium ICC168, Citrobacter rodentium ICC168, Citrobacter rodentium str. ICC168, Citrobacter rodentium strain ICC168
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.