STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROD_42681Putative membrane protein. (431 aa)    
Predicted Functional Partners:
ROD_46131
Conserved hypothetical protein.
  
 
 0.648
napD
Putative napAB assembly protein; Chaperone for NapA, the catalytic subunit of the periplasmic nitrate reductase. It binds directly and specifically to the twin- arginine signal peptide of NapA, preventing premature interaction with the Tat translocase and premature export.
  
     0.641
ROD_18821
Putative carbon-nitrogen hydrolase.
  
     0.540
ROD_10261
Putative exported protein; Belongs to the UPF0319 family.
  
     0.517
ROD_47661
Conserved hypothetical protein; Belongs to the UPF0597 family.
 
  
 0.453
ROD_46291
Putative anti-sigma factor antagonist.
  
     0.435
ROD_13851
Putative oxidoreductase subunit.
  
     0.432
cbpM
Chaperone-modulator protein; Interacts with CbpA and inhibits both the DnaJ-like co- chaperone activity and the DNA binding activity of CbpA. Together with CbpA, modulates the activity of the DnaK chaperone system. Does not inhibit the co-chaperone activity of DnaJ.
  
     0.423
ROD_37901
Putative membrane protein.
  
     0.420
ROD_35661
Possible exported protein.
  
     0.414
Your Current Organism:
Citrobacter rodentium
NCBI taxonomy Id: 637910
Other names: C. rodentium ICC168, Citrobacter rodentium ICC168, Citrobacter rodentium str. ICC168, Citrobacter rodentium strain ICC168
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.