STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
creCTwo-component system sensor kinase. (474 aa)    
Predicted Functional Partners:
creB
Two-component response regulator.
 
 0.998
creD
Inner membrane protein.
 
   
 0.933
arcB
Aerobic respiration control protein (bifunctional two-component sensor kinase/response regulator).
 
 
0.889
creA
Putative exported protein.
     
 0.807
barA
Two-component sensor kinase/response regulator.
 
 
0.798
phoB
Phosphate regulon two-component system, response regulator.
 
 
 0.659
ROD_50441
Two-component response regulator.
 
 0.654
ROD_48671
Transcriptional regulator.
  
 
 
 0.640
baeR
Two-component response regulator.
 
 
 0.623
ROD_31481
Transcriptional regulator.
 
 
 0.622
Your Current Organism:
Citrobacter rodentium
NCBI taxonomy Id: 637910
Other names: C. rodentium ICC168, Citrobacter rodentium ICC168, Citrobacter rodentium str. ICC168, Citrobacter rodentium strain ICC168
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.