node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKP63555.1 | AKP65642.1 | ABN16_00070 | ABN16_11955 | GTPase; In Bacillus subtilis this enzyme appears to be involved in 30S ribosomal RNA subunit biogenesis; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.673 |
AKP63555.1 | cshB | ABN16_00070 | ABN16_00655 | GTPase; In Bacillus subtilis this enzyme appears to be involved in 30S ribosomal RNA subunit biogenesis; Derived by automated computational analysis using gene prediction method: Protein Homology. | DEAD/DEAH box helicase; Probable DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures. | 0.656 |
AKP63555.1 | rplC | ABN16_00070 | ABN16_09880 | GTPase; In Bacillus subtilis this enzyme appears to be involved in 30S ribosomal RNA subunit biogenesis; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.705 |
AKP63555.1 | rplD | ABN16_00070 | ABN16_09885 | GTPase; In Bacillus subtilis this enzyme appears to be involved in 30S ribosomal RNA subunit biogenesis; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L4; Forms part of the polypeptide exit tunnel. | 0.726 |
AKP63555.1 | rplM | ABN16_00070 | ABN16_10035 | GTPase; In Bacillus subtilis this enzyme appears to be involved in 30S ribosomal RNA subunit biogenesis; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.669 |
AKP63648.1 | alaS | ABN16_00660 | ABN16_00650 | Oligoribonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.643 |
AKP63648.1 | cshB | ABN16_00660 | ABN16_00655 | Oligoribonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | DEAD/DEAH box helicase; Probable DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures. | 0.866 |
AKP63648.1 | dinB | ABN16_00660 | ABN16_00665 | Oligoribonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII. | 0.653 |
AKP63648.1 | rny-2 | ABN16_00660 | ABN16_06555 | Oligoribonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ribonuclease Y; Endoribonuclease that initiates mRNA decay. | 0.407 |
AKP65642.1 | AKP63555.1 | ABN16_11955 | ABN16_00070 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | GTPase; In Bacillus subtilis this enzyme appears to be involved in 30S ribosomal RNA subunit biogenesis; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.673 |
AKP65642.1 | cshB | ABN16_11955 | ABN16_00655 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | DEAD/DEAH box helicase; Probable DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures. | 0.655 |
AKP65642.1 | rplC | ABN16_11955 | ABN16_09880 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.995 |
AKP65642.1 | rplD | ABN16_11955 | ABN16_09885 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L4; Forms part of the polypeptide exit tunnel. | 0.999 |
AKP65642.1 | rplM | ABN16_11955 | ABN16_10035 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.983 |
AKP65642.1 | rpsD | ABN16_11955 | ABN16_00820 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.999 |
alaS | AKP63648.1 | ABN16_00650 | ABN16_00660 | alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | Oligoribonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.643 |
alaS | cshB | ABN16_00650 | ABN16_00655 | alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | DEAD/DEAH box helicase; Probable DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures. | 0.617 |
cshB | AKP63555.1 | ABN16_00655 | ABN16_00070 | DEAD/DEAH box helicase; Probable DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures. | GTPase; In Bacillus subtilis this enzyme appears to be involved in 30S ribosomal RNA subunit biogenesis; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.656 |
cshB | AKP63648.1 | ABN16_00655 | ABN16_00660 | DEAD/DEAH box helicase; Probable DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures. | Oligoribonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.866 |
cshB | AKP65642.1 | ABN16_00655 | ABN16_11955 | DEAD/DEAH box helicase; Probable DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.655 |