STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKP65393.1ATP:cob(I)alamin adenosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (156 aa)    
Predicted Functional Partners:
AKP65392.1
ATP--cobalamin adenosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Cob(I)alamin adenosyltransferase family.
     0.984
AKP65386.1
Propanediol dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.915
pduC
Propanediol dehydratase; With pduED catalyzes the formation of propionaldehyde from 1,2-propanediol; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.907
AKP66072.1
Glycerol dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.906
AKP65388.1
Propanediol dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.905
AKP65387.1
Propanediol dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.904
AKP65384.1
Propanediol utilization protein; Carboxysome shell protein; may be involved in the formation of the polyhedral organelles involved in propanediol degradation; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.888
AKP66073.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.888
AKP65067.1
ATP:cob(I)alamin adenosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Cob(I)alamin adenosyltransferase family.
      0.879
AKP65395.1
Propanediol utilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.839
Your Current Organism:
Lactobacillus koreensis
NCBI taxonomy Id: 637971
Other names: DSM 27983, JCM 16448, KCTC 13530, L. koreensis, Lactobacillus koreensis Bui et al. 2011, strain DCY50
Server load: low (8%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.