STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEW38139.1ABC transporter, permease protein; COG: COG4209; Pfam: PF00528. (305 aa)    
Predicted Functional Partners:
EEW38141.1
ABC transporter, solute-binding protein.
 
 
 0.995
EEW37670.1
ABC transporter, permease protein; COG: COG0395; Pfam: PF00528; InterPro: IPR000515.
 
 0.991
EEW38140.1
ABC transporter, permease protein; COG: COG0395; Pfam: PF00528.
 
 0.984
EEW37669.1
ABC transporter, solute-binding protein; COG: COG1653; Pfam: PF01547; InterPro: IPR006059.
 
 
 0.886
EEW37386.1
ABC transporter, permease protein; COG: COG0395; Pfam: PF00528; InterPro: IPR000515.
 
 0.849
EEW36657.1
ABC transporter, permease protein; COG: COG0395; Pfam: PF00528; InterPro: IPR000515.
 
 0.843
EEW36850.1
ABC transporter, permease protein; COG: COG0395; Pfam: PF00528; InterPro: IPR000515.
 
 0.820
EEW38137.1
Transcriptional regulator, AraC family; COG: COG4753; Pfam: PF00072,PF00165; InterPro: IPR001789.
 
  
 0.694
EEW38142.1
Hypothetical protein.
 
    0.683
EEW38138.1
Histidine kinase; COG: COG2972; Pfam: PF06580,PF02518; InterPro: IPR010559.
 
   
 0.647
Your Current Organism:
Granulicatella adiacens
NCBI taxonomy Id: 638301
Other names: G. adiacens ATCC 49175, Granulicatella adiacens ATCC 49175, Granulicatella adiacens str. ATCC 49175, Granulicatella adiacens strain ATCC 49175
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