Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EEW36820.1 | EEW36846.1 | HMPREF0444_1552 | HMPREF0444_1064 | DHHA1 domain protein; Has phosphodiesterase (PDE) activity against cyclic-di-AMP (c-di-AMP); Belongs to the GdpP/PdeA phosphodiesterase family. | Hypothetical protein; COG: COG3870; Pfam: PF06153; InterPro: IPR010375. | 0.420 |
EEW36841.1 | EEW36842.1 | HMPREF0444_1059 | HMPREF0444_1060 | Hypothetical protein; Pfam: PF01925. | Hypothetical protein; COG: COG1262; Pfam: PF03781; InterPro: IPR005532. | 0.795 |
EEW36841.1 | EEW36843.1 | HMPREF0444_1059 | HMPREF0444_1061 | Hypothetical protein; Pfam: PF01925. | Arylsulfatase; Pfam: PF00884; InterPro: IPR000917. | 0.827 |
EEW36841.1 | EEW36844.1 | HMPREF0444_1059 | HMPREF0444_1062 | Hypothetical protein; Pfam: PF01925. | Hypothetical protein; Involved in initiation control of chromosome replication. Belongs to the YabA family. | 0.773 |
EEW36841.1 | EEW36846.1 | HMPREF0444_1059 | HMPREF0444_1064 | Hypothetical protein; Pfam: PF01925. | Hypothetical protein; COG: COG3870; Pfam: PF06153; InterPro: IPR010375. | 0.729 |
EEW36841.1 | holB | HMPREF0444_1059 | HMPREF0444_1063 | Hypothetical protein; Pfam: PF01925. | DNA polymerase III, delta' subunit; COG: COG0470; InterPro: IPR004622. | 0.736 |
EEW36841.1 | tmk | HMPREF0444_1059 | HMPREF0444_1065 | Hypothetical protein; Pfam: PF01925. | dTMP kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | 0.726 |
EEW36842.1 | EEW36841.1 | HMPREF0444_1060 | HMPREF0444_1059 | Hypothetical protein; COG: COG1262; Pfam: PF03781; InterPro: IPR005532. | Hypothetical protein; Pfam: PF01925. | 0.795 |
EEW36842.1 | EEW36843.1 | HMPREF0444_1060 | HMPREF0444_1061 | Hypothetical protein; COG: COG1262; Pfam: PF03781; InterPro: IPR005532. | Arylsulfatase; Pfam: PF00884; InterPro: IPR000917. | 0.987 |
EEW36842.1 | EEW36844.1 | HMPREF0444_1060 | HMPREF0444_1062 | Hypothetical protein; COG: COG1262; Pfam: PF03781; InterPro: IPR005532. | Hypothetical protein; Involved in initiation control of chromosome replication. Belongs to the YabA family. | 0.773 |
EEW36842.1 | EEW36846.1 | HMPREF0444_1060 | HMPREF0444_1064 | Hypothetical protein; COG: COG1262; Pfam: PF03781; InterPro: IPR005532. | Hypothetical protein; COG: COG3870; Pfam: PF06153; InterPro: IPR010375. | 0.723 |
EEW36842.1 | holB | HMPREF0444_1060 | HMPREF0444_1063 | Hypothetical protein; COG: COG1262; Pfam: PF03781; InterPro: IPR005532. | DNA polymerase III, delta' subunit; COG: COG0470; InterPro: IPR004622. | 0.723 |
EEW36842.1 | tmk | HMPREF0444_1060 | HMPREF0444_1065 | Hypothetical protein; COG: COG1262; Pfam: PF03781; InterPro: IPR005532. | dTMP kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | 0.713 |
EEW36843.1 | EEW36841.1 | HMPREF0444_1061 | HMPREF0444_1059 | Arylsulfatase; Pfam: PF00884; InterPro: IPR000917. | Hypothetical protein; Pfam: PF01925. | 0.827 |
EEW36843.1 | EEW36842.1 | HMPREF0444_1061 | HMPREF0444_1060 | Arylsulfatase; Pfam: PF00884; InterPro: IPR000917. | Hypothetical protein; COG: COG1262; Pfam: PF03781; InterPro: IPR005532. | 0.987 |
EEW36843.1 | EEW36844.1 | HMPREF0444_1061 | HMPREF0444_1062 | Arylsulfatase; Pfam: PF00884; InterPro: IPR000917. | Hypothetical protein; Involved in initiation control of chromosome replication. Belongs to the YabA family. | 0.773 |
EEW36843.1 | EEW36846.1 | HMPREF0444_1061 | HMPREF0444_1064 | Arylsulfatase; Pfam: PF00884; InterPro: IPR000917. | Hypothetical protein; COG: COG3870; Pfam: PF06153; InterPro: IPR010375. | 0.723 |
EEW36843.1 | holB | HMPREF0444_1061 | HMPREF0444_1063 | Arylsulfatase; Pfam: PF00884; InterPro: IPR000917. | DNA polymerase III, delta' subunit; COG: COG0470; InterPro: IPR004622. | 0.744 |
EEW36843.1 | tmk | HMPREF0444_1061 | HMPREF0444_1065 | Arylsulfatase; Pfam: PF00884; InterPro: IPR000917. | dTMP kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | 0.712 |
EEW36844.1 | EEW36841.1 | HMPREF0444_1062 | HMPREF0444_1059 | Hypothetical protein; Involved in initiation control of chromosome replication. Belongs to the YabA family. | Hypothetical protein; Pfam: PF01925. | 0.773 |
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