STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEW36923.1Hypothetical protein; COG: COG4471. (99 aa)    
Predicted Functional Partners:
ftsW2
Cell cycle protein, FtsW/RodA/SpoVE family; COG: COG0772; Pfam: PF01098; InterPro: IPR001182; Belongs to the SEDS family.
       0.791
EEW36925.1
Hypothetical protein; COG: COG4838; Pfam: PF07408; InterPro: IPR009983; Belongs to the UPF0358 family.
 
     0.751
EEW37522.1
Hypothetical protein; COG: COG4470; Pfam: PF06265; InterPro: IPR009370.
  
   
 0.696
rpoE
DNA-directed RNA polymerase, delta subunit; Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; Belongs to the RpoE family.
  
     0.670
EEW36844.1
Hypothetical protein; Involved in initiation control of chromosome replication. Belongs to the YabA family.
 
     0.662
secG
Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
  
     0.625
EEW37962.1
Metallopeptidase, SprT family; COG: COG3091; Pfam: PF03926; InterPro: IPR006640; Belongs to the SprT family.
 
     0.621
EEW37922.1
Hypothetical protein; COG: COG3906; Pfam: PF06949; InterPro: IPR009711; Belongs to the UPF0473 family.
  
     0.554
EEW36906.1
RNA methyltransferase, RsmD family; COG: COG0742; Pfam: PF03602; InterPro: IPR004398.
 
  
 0.534
EEW37441.1
CBS domain protein; COG: COG0517; Pfam: PF00571; InterPro: IPR000644.
 
     0.531
Your Current Organism:
Granulicatella adiacens
NCBI taxonomy Id: 638301
Other names: G. adiacens ATCC 49175, Granulicatella adiacens ATCC 49175, Granulicatella adiacens str. ATCC 49175, Granulicatella adiacens strain ATCC 49175
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.