STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEW37207.1O-methyltransferase; COG: COG4122; Pfam: PF01596; InterPro: IPR002935. (242 aa)    
Predicted Functional Partners:
EEW37208.1
Hypothetical protein.
       0.774
EEW37158.1
Peptidase, U32 family; COG: COG0826; Pfam: PF01136; InterPro: IPR001539.
 
  
 0.752
EEW37157.1
Peptidase, U32 family; COG: COG0826; Pfam: PF01136; InterPro: IPR001539.
 
  
 0.725
gltX
glutamate--tRNA ligase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.
  
   0.666
EEW36523.1
Hypothetical protein.
  
  
 0.632
EEW37209.1
Hypothetical protein; Pfam: PF06570; InterPro: IPR009214.
 
     0.627
recJ
single-stranded-DNA-specific exonuclease RecJ; COG: COG0608; Pfam: PF01368,PF02272,PF01336; InterPro: IPR004610.
   
    0.590
EEW37482.1
GroES-like protein; COG: COG1063; Pfam: PF08240,PF00107; InterPro: IPR002085.
  
 
  0.572
glyA
Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
   
 
 0.569
EEW38232.1
Hypothetical protein; COG: COG2706; InterPro: IPR015943.
    
  0.564
Your Current Organism:
Granulicatella adiacens
NCBI taxonomy Id: 638301
Other names: G. adiacens ATCC 49175, Granulicatella adiacens ATCC 49175, Granulicatella adiacens str. ATCC 49175, Granulicatella adiacens strain ATCC 49175
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.