STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
crcBProtein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family. (123 aa)    
Predicted Functional Partners:
gpmB
Putative alpha-ribazole phosphatase; COG: COG0406; Pfam: PF00300; InterPro: IPR013078; Belongs to the phosphoglycerate mutase family.
  
    0.794
cbiE
Precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; COG: COG2241; Pfam: PF00590; InterPro: IPR012818.
       0.742
cbiG
CbiG; COG: COG2073; Pfam: PF01890; InterPro: IPR002750.
       0.738
EEQ49507.1
GHMP kinase, N-terminal domain protein; Pfam: PF00288; InterPro: IPR006204.
       0.701
cobS
adenosylcobinamide-GDP ribazoletransferase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.
       0.701
cbiT
precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; COG: COG2242; Pfam: PF08242; InterPro: IPR014008.
       0.692
cobD
Cobalamin biosynthesis protein CobD; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.
       0.691
cobQ
Cobyric acid synthase CobQ; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.
       0.691
cobU
Putative adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase; COG: COG2087; Pfam: PF02283; InterPro: IPR003203.
       0.691
cobB
Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.
       0.691
Your Current Organism:
Selenomonas flueggei
NCBI taxonomy Id: 638302
Other names: S. flueggei ATCC 43531, Selenomonas flueggei ATCC 43531, Selenomonas flueggei str. ATCC 43531, Selenomonas flueggei strain ATCC 43531
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