STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEQ49586.1FHA domain protein; Pfam: PF00498; InterPro: IPR000253. (148 aa)    
Predicted Functional Partners:
EEQ49587.1
FHA domain protein; Pfam: PF00498; InterPro: IPR000253.
 
     0.954
sps1
Kinase domain protein; COG: COG0515; Pfam: PF00069,PF03793; InterPro: IPR000719.
 
 
 
 0.936
prpC
Protein phosphatase 2C; COG: COG0631; Pfam: PF00481; InterPro: IPR001932.
 
 
 0.923
EEQ49583.1
Penicillin-binding protein, transpeptidase domain protein; COG: COG0768; Pfam: PF00905; InterPro: IPR001460.
 
   
 0.913
spoVE2
Cell cycle protein, FtsW/RodA/SpoVE family; COG: COG0772; Pfam: PF01098; InterPro: IPR001182; Belongs to the SEDS family.
 
   
 0.906
ribB
3,4-dihydroxy-2-butanone-4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
 0.806
fliN
Flagellar motor switch protein FliN; COG: COG1776; Pfam: PF04509,PF01052; InterPro: IPR012826.
  
 
 0.787
sbcD
Exonuclease SbcCD, D subunit; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family.
    
  0.763
sbcC
Putative DNA sulfur modification protein DndD; COG: COG0419; Pfam: PF02463.
    
  0.762
folE2
TIGR00294 family protein; Converts GTP to 7,8-dihydroneopterin triphosphate.
    
  0.757
Your Current Organism:
Selenomonas flueggei
NCBI taxonomy Id: 638302
Other names: S. flueggei ATCC 43531, Selenomonas flueggei ATCC 43531, Selenomonas flueggei str. ATCC 43531, Selenomonas flueggei strain ATCC 43531
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.