STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEQ47636.1NAD dependent epimerase/dehydratase family protein; Pfam: PF01370; InterPro: IPR016040. (281 aa)    
Predicted Functional Partners:
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
  
 0.934
EEQ48692.1
Hypothetical protein.
  
 0.928
galT
UTP--hexose-1-phosphate uridylyltransferase; COG: COG4468; Pfam: PF01087,PF02744; InterPro: IPR000766.
  
 
 0.903
ugd
Nucleotide sugar dehydrogenase; COG: COG1004; Pfam: PF03721,PF00984; InterPro: IPR016040.
  
 
 0.855
EEQ47644.1
NAD dependent epimerase/dehydratase family protein; COG: COG0451; Pfam: PF01370; InterPro: IPR016040.
 
 0.832
EEQ47637.1
Transketolase, C-terminal domain protein; COG: COG3958; Pfam: PF02779,PF02780; InterPro: IPR005475.
       0.789
tktl2-2
Transketolase, thiamine diphosphate binding domain protein; COG: COG3959; Pfam: PF00456; InterPro: IPR005474.
       0.784
EEQ47633.1
Hypothetical protein.
       0.773
EEQ47634.1
Hypothetical protein.
       0.773
EEQ47635.1
Hypothetical protein.
       0.773
Your Current Organism:
Selenomonas flueggei
NCBI taxonomy Id: 638302
Other names: S. flueggei ATCC 43531, Selenomonas flueggei ATCC 43531, Selenomonas flueggei str. ATCC 43531, Selenomonas flueggei strain ATCC 43531
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.