STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Thal_0010KEGG: hha:Hhal_0630 CRISPR-associated Cmr5 family protein; TIGRFAM: CRISPR-associated protein, Cmr5 family; PFAM: CRISPR-associated protein TM1791.1. (127 aa)    
Predicted Functional Partners:
Thal_0007
TIGRFAM: CRISPR-associated protein, Crm2 family; KEGG: mxa:MXAN_7281 CRISPR-associated Cmr2 family protein.
 
 
 
 0.991
Thal_0009
KEGG: tgr:Tgr7_1793 CRISPR-associated RAMP protein, Cmr4 family; TIGRFAM: CRISPR-associated RAMP protein, Cmr4 family; PFAM: protein of unknown function DUF324.
 
 
 
 0.991
Thal_0011
KEGG: tgr:Tgr7_1795 CRISPR-associated RAMP protein, Cmr6 family; TIGRFAM: CRISPR-associated RAMP protein, Cmr6 family; PFAM: protein of unknown function DUF324.
 
 
 
 0.991
Thal_0006
CRISPR-associated RAMP protein, Cmr1 family; KEGG: sat:SYN_02252 putative cytoplasmic protein; TIGRFAM: CRISPR-associated RAMP protein, Cmr1 family; PFAM: protein of unknown function DUF324.
 
 
 
 0.989
Thal_0008
PFAM: CRISPR-associated protein, Cmr3.
   
 
 0.889
Thal_0005
TIGRFAM: CRISPR-associated protein Cas6; PFAM: protein of unknown function DUF57.
 
     0.848
Thal_0012
Hypothetical protein.
       0.788
Thal_0001
Hypothetical protein.
       0.773
Thal_0002
Hypothetical protein.
       0.773
Thal_0003
Hypothetical protein.
       0.773
Your Current Organism:
Thermocrinis albus
NCBI taxonomy Id: 638303
Other names: T. albus DSM 14484, Thermocrinis albus DSM 14484, Thermocrinis albus HI 11/12, Thermocrinis albus str. DSM 14484, Thermocrinis albus strain DSM 14484
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.