STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Thal_0804PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pna:Pnap_2831 FAD-dependent pyridine nucleotide-disulphide oxidoreductase. (429 aa)    
Predicted Functional Partners:
Thal_0799
PFAM: acriflavin resistance protein; KEGG: gur:Gura_4228 acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
     0.708
Thal_0370
Cytochrome c1-like protein; KEGG: nis:NIS_1583 ubiquinol cytochrome c oxidoreductase, cytochrome c1 subunit.
  
 
 0.696
Thal_1106
Hydrogenase expression/formation protein; KEGG: gme:Gmet_3329 peptidase M52, hydrogenase maturation peptidase; TIGRFAM: hydrogenase expression/formation protein; hydrogenase maturation protease; PFAM: peptidase M52 hydrogen uptake protein.
    
   0.669
Thal_1407
KEGG: afr:AFE_0705 hydrogenase maturation protease; TIGRFAM: hydrogenase maturation protease; PFAM: peptidase M52 hydrogen uptake protein.
    
   0.669
Thal_0805
PFAM: protein of unknown function DUF28; KEGG: dps:DP2908 hypothetical protein.
  
    0.557
Thal_0806
Endoribonuclease L-PSP; KEGG: ppr:PBPRB0241 translation initiation inhibitor; TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP.
       0.551
Thal_0807
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.
       0.551
secD
Protein-export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.
       0.537
Thal_1002
SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; KEGG: nis:NIS_0364 coproporphyrinogen III oxidase; PFAM: HemN domain protein; Radical SAM domain protein; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
  
  
 0.500
Thal_0987
KEGG: aeh:Mlg_2763 glutamate synthase subunit alpha; PFAM: ferredoxin-dependent glutamate synthase; glutamate synthase alpha subunit domain protein; glutamate synthase; glutamine amidotransferase class-II.
      
 0.472
Your Current Organism:
Thermocrinis albus
NCBI taxonomy Id: 638303
Other names: T. albus DSM 14484, Thermocrinis albus DSM 14484, Thermocrinis albus HI 11/12, Thermocrinis albus str. DSM 14484, Thermocrinis albus strain DSM 14484
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