Thal_0809 protein (Thermocrinis albus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

Thal_0809

KEGG: hypothetical protein. (394 aa)

Predicted Functional Partners:

hisF

0.563

Thal_0811

0.563

kdsB

0.563

Thal_0813

0.552

Your Current Organism:

Thermocrinis albus

NCBI taxonomy Id: 638303
Other names: T. albus DSM 14484, Thermocrinis albus DSM 14484, Thermocrinis albus HI 11/12, Thermocrinis albus str. DSM 14484, Thermocrinis albus strain DSM 14484

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Thal_0809	Thal_0811	Thal_0809	Thal_0811	KEGG: hypothetical protein.	PFAM: NUDIX hydrolase; KEGG: nis:NIS_1286 NUDIX hydrolase; Belongs to the Nudix hydrolase family.	0.563
Thal_0809	Thal_0813	Thal_0809	Thal_0813	KEGG: hypothetical protein.	Protein of unknown function UPF0278; RNA-free RNase P that catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. Belongs to the HARP family.	0.552
Thal_0809	hisF	Thal_0809	Thal_0810	KEGG: hypothetical protein.	Imidazoleglycerol phosphate synthase, cyclase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.	0.563
Thal_0809	kdsB	Thal_0809	Thal_0812	KEGG: hypothetical protein.	3-deoxy-D-manno- octulosonatecytidylyltransferase; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria.	0.563
Thal_0811	Thal_0809	Thal_0811	Thal_0809	PFAM: NUDIX hydrolase; KEGG: nis:NIS_1286 NUDIX hydrolase; Belongs to the Nudix hydrolase family.	KEGG: hypothetical protein.	0.563
Thal_0811	Thal_0813	Thal_0811	Thal_0813	PFAM: NUDIX hydrolase; KEGG: nis:NIS_1286 NUDIX hydrolase; Belongs to the Nudix hydrolase family.	Protein of unknown function UPF0278; RNA-free RNase P that catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. Belongs to the HARP family.	0.757
Thal_0811	hisF	Thal_0811	Thal_0810	PFAM: NUDIX hydrolase; KEGG: nis:NIS_1286 NUDIX hydrolase; Belongs to the Nudix hydrolase family.	Imidazoleglycerol phosphate synthase, cyclase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.	0.780
Thal_0811	kdsB	Thal_0811	Thal_0812	PFAM: NUDIX hydrolase; KEGG: nis:NIS_1286 NUDIX hydrolase; Belongs to the Nudix hydrolase family.	3-deoxy-D-manno- octulosonatecytidylyltransferase; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria.	0.773
Thal_0813	Thal_0809	Thal_0813	Thal_0809	Protein of unknown function UPF0278; RNA-free RNase P that catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. Belongs to the HARP family.	KEGG: hypothetical protein.	0.552
Thal_0813	Thal_0811	Thal_0813	Thal_0811	Protein of unknown function UPF0278; RNA-free RNase P that catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. Belongs to the HARP family.	PFAM: NUDIX hydrolase; KEGG: nis:NIS_1286 NUDIX hydrolase; Belongs to the Nudix hydrolase family.	0.757
Thal_0813	hisF	Thal_0813	Thal_0810	Protein of unknown function UPF0278; RNA-free RNase P that catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. Belongs to the HARP family.	Imidazoleglycerol phosphate synthase, cyclase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.	0.757
Thal_0813	kdsB	Thal_0813	Thal_0812	Protein of unknown function UPF0278; RNA-free RNase P that catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. Belongs to the HARP family.	3-deoxy-D-manno- octulosonatecytidylyltransferase; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria.	0.757
hisF	Thal_0809	Thal_0810	Thal_0809	Imidazoleglycerol phosphate synthase, cyclase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.	KEGG: hypothetical protein.	0.563
hisF	Thal_0811	Thal_0810	Thal_0811	Imidazoleglycerol phosphate synthase, cyclase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.	PFAM: NUDIX hydrolase; KEGG: nis:NIS_1286 NUDIX hydrolase; Belongs to the Nudix hydrolase family.	0.780
hisF	Thal_0813	Thal_0810	Thal_0813	Imidazoleglycerol phosphate synthase, cyclase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.	Protein of unknown function UPF0278; RNA-free RNase P that catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. Belongs to the HARP family.	0.757
hisF	kdsB	Thal_0810	Thal_0812	Imidazoleglycerol phosphate synthase, cyclase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.	3-deoxy-D-manno- octulosonatecytidylyltransferase; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria.	0.773
kdsB	Thal_0809	Thal_0812	Thal_0809	3-deoxy-D-manno- octulosonatecytidylyltransferase; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria.	KEGG: hypothetical protein.	0.563
kdsB	Thal_0811	Thal_0812	Thal_0811	3-deoxy-D-manno- octulosonatecytidylyltransferase; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria.	PFAM: NUDIX hydrolase; KEGG: nis:NIS_1286 NUDIX hydrolase; Belongs to the Nudix hydrolase family.	0.773
kdsB	Thal_0813	Thal_0812	Thal_0813	3-deoxy-D-manno- octulosonatecytidylyltransferase; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria.	Protein of unknown function UPF0278; RNA-free RNase P that catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. Belongs to the HARP family.	0.757
kdsB	hisF	Thal_0812	Thal_0810	3-deoxy-D-manno- octulosonatecytidylyltransferase; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria.	Imidazoleglycerol phosphate synthase, cyclase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.	0.773

Server load: low (20%) [HD]

Permalink

Network

Neighborhood

Experiments

Co-occurrence

Databases

Fusion

Textmining

Co-expression

© STRING Consortium 2026

Credits

Access

Info

About