STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Thal_1330KEGG: ilo:IL0698 hypothetical protein. (78 aa)    
Predicted Functional Partners:
Thal_1329
PFAM: Anion-transporting ATPase; KEGG: wsu:WS1546 arsenical pump-driving ATPase.
 
     0.939
Thal_1331
PFAM: cytochrome c class I; KEGG: lhk:LHK_00036 cytochrome c, class I precursor.
       0.781
Thal_1328
PFAM: protein of unknown function DUF752; KEGG: nis:NIS_1599 hypothetical protein.
       0.773
Thal_0588
Hypothetical protein; KEGG: tgr:Tgr7_0162 thioredoxin domain protein.
  
     0.619
murI
Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis.
       0.558
Thal_1478
PFAM: cytochrome oxidase assembly; KEGG: gur:Gura_0405 cytochrome oxidase assembly.
  
     0.517
Thal_0948
TIGRFAM: arsenite-activated ATPase ArsA; KEGG: dal:Dalk_3989 arsenite-activated ATPase ArsA; PFAM: Anion-transporting ATPase.
 
     0.471
Your Current Organism:
Thermocrinis albus
NCBI taxonomy Id: 638303
Other names: T. albus DSM 14484, Thermocrinis albus DSM 14484, Thermocrinis albus HI 11/12, Thermocrinis albus str. DSM 14484, Thermocrinis albus strain DSM 14484
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