STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDC38511.1Selenophosphate synthase. (719 aa)    
Predicted Functional Partners:
SDC38232.1
Multisubunit potassium/proton antiporter, PhaA subunit /multisubunit potassium/proton antiporter, PhaB subunit.
  
 
 0.946
SDD06582.1
Thioredoxin reductase (NADPH).
    
 0.931
SDC47660.1
Thioredoxin.
 
 
 0.915
SDE38022.1
NAD-dependent formate dehydrogenase flavoprotein subunit.
     
 0.910
SDC72008.1
Thioredoxin.
   
 0.901
SDD63695.1
Thioredoxin; Belongs to the thioredoxin family.
   
 0.901
SDC38323.1
Multisubunit potassium/proton antiporter, PhaD subunit.
    
  0.899
SDD56628.1
Periplasmic nitrate reductase subunit NapG.
  
 
 0.898
SDC38554.1
tRNA 2-selenouridine synthase; Belongs to the SelU family.
 
   
 0.884
SDD12189.1
NADPH-dependent glutamate synthase beta chain.
  
 
 0.877
Your Current Organism:
Ruegeria marina
NCBI taxonomy Id: 639004
Other names: CGMCC 1.9108, JCM 16262, R. marina, Ruegeria marina Huo et al. 2011, Ruegeria sp. ZH17, strain ZH17
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.