STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDC72665.1Hypothetical protein. (508 aa)    
Predicted Functional Partners:
SDE46929.1
Hypothetical protein.
  
     0.715
SDC39543.1
Hypothetical protein.
  
     0.700
SDC72587.1
Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
       0.688
SDD80899.1
Hypothetical protein.
  
     0.683
SDC72704.1
Microcin-processing peptidase 1. Unknown type peptidase. MEROPS family U62.
       0.670
SDC72739.1
Myo-inositol-1(or 4)-monophosphatase.
       0.670
SDD77426.1
Protein of unknown function.
 
   
 0.661
SDE28362.1
SH3 domain-containing protein.
  
     0.660
SDC11811.1
Uncharacterized conserved protein YibQ, putative polysaccharide deacetylase 2 family.
  
     0.656
SDC50304.1
Membrane associated serine protease, rhomboid family.
 
    0.651
Your Current Organism:
Ruegeria marina
NCBI taxonomy Id: 639004
Other names: CGMCC 1.9108, JCM 16262, R. marina, Ruegeria marina Huo et al. 2011, Ruegeria sp. ZH17, strain ZH17
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.