STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDC91394.1Hint domain-containing protein. (169 aa)    
Predicted Functional Partners:
SDC46948.1
Pectate lyase superfamily protein.
 
 
   0.823
SDD10934.1
Type III flagellar switch regulator (C-ring) FliN C-term.
  
   0.736
SDD65852.1
Core-2/I-Branching enzyme.
  
     0.722
SDE17392.1
Hemolysin-type calcium-binding repeat-containing protein.
  
  0.673
SDD11220.1
Hypothetical protein.
  
     0.670
SDC64382.1
Hint domain-containing protein.
  
     0.653
SDD12589.1
Hypothetical protein.
  
     0.642
SDE05242.1
Hypothetical protein.
  
     0.636
SDC17717.1
Ca2+-binding protein, RTX toxin-related.
  
     0.633
SDD65811.1
LPS sulfotransferase NodH.
  
     0.619
Your Current Organism:
Ruegeria marina
NCBI taxonomy Id: 639004
Other names: CGMCC 1.9108, JCM 16262, R. marina, Ruegeria marina Huo et al. 2011, Ruegeria sp. ZH17, strain ZH17
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.