STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDC93469.1Sarcosine oxidase subunit gamma. (188 aa)    
Predicted Functional Partners:
SDC93506.1
Sarcosine oxidase subunit alpha; Belongs to the GcvT family.
 
 0.999
SDC93546.1
Sarcosine oxidase subunit delta.
 
 0.999
SDD42176.1
Sarcosine oxidase subunit alpha; Belongs to the GcvT family.
 
 0.997
SDD75700.1
Sarcosine oxidase subunit alpha; Belongs to the GcvT family.
 
 0.994
SDE53870.1
Sarcosine oxidase subunit alpha; Belongs to the GcvT family.
 
 0.993
SDC99013.1
Dimethylglycine dehydrogenase; Belongs to the GcvT family.
 
 0.988
SDD75648.1
Sarcosine oxidase subunit delta.
 
 0.988
SDC17622.1
Dimethylglycine dehydrogenase; Belongs to the GcvT family.
  
 0.984
SDC93620.1
Sarcosine oxidase subunit beta.
 
 0.981
SDE53784.1
Dimethylglycine dehydrogenase; Belongs to the GcvT family.
  
 0.979
Your Current Organism:
Ruegeria marina
NCBI taxonomy Id: 639004
Other names: CGMCC 1.9108, JCM 16262, R. marina, Ruegeria marina Huo et al. 2011, Ruegeria sp. ZH17, strain ZH17
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.