STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD05560.1Transcriptional regulator, AsnC family. (153 aa)    
Predicted Functional Partners:
SDE35053.1
Transcriptional regulator, AsnC family.
  
     0.715
SDD05519.1
Protein of unknown function.
 
     0.599
SDE78967.1
Transcriptional regulator, AsnC family.
  
     0.510
SDE02289.1
Transcriptional regulator, AsnC family.
  
     0.506
SDE71089.1
Transcriptional regulator, AsnC family.
  
     0.506
SDD05469.1
Sulfite reductase (NADPH) hemoprotein beta-component.
     
 0.441
SDD05423.1
Phosphoadenylylsulfate reductase (thioredoxin); Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.
       0.420
SDD05379.1
Protein of unknown function.
       0.416
Your Current Organism:
Ruegeria marina
NCBI taxonomy Id: 639004
Other names: CGMCC 1.9108, JCM 16262, R. marina, Ruegeria marina Huo et al. 2011, Ruegeria sp. ZH17, strain ZH17
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.