STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD09854.1Monoheme cytochrome SoxX (sulfur oxidation). (157 aa)    
Predicted Functional Partners:
SDD09942.1
Diheme cytochrome SoxA (sulfur oxidation).
 
 
 0.999
SDD10050.1
Sulfur dehydrogenase subunit SoxD.
 
 
 0.999
SDD09882.1
Thiosulfate-binding protein SoxY.
 
  
 0.995
SDD10011.1
Sulfur dehydrogenase subunit SoxC.
 
 
 0.995
SDD09912.1
Sulfur compound chelating protein SoxZ.
 
  
 0.994
SDD09978.1
Sulfate thiol esterase SoxB; Belongs to the 5'-nucleotidase family.
 
  
 0.979
SDE11797.1
Anaerobic selenocysteine-containing dehydrogenase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 0.941
SDE31126.1
Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 0.917
SDD09821.1
Thioredoxin-related protein.
 
     0.913
SDE31086.1
Ubiquinol-cytochrome c reductase cytochrome b subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 0.910
Your Current Organism:
Ruegeria marina
NCBI taxonomy Id: 639004
Other names: CGMCC 1.9108, JCM 16262, R. marina, Ruegeria marina Huo et al. 2011, Ruegeria sp. ZH17, strain ZH17
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