Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDC05061.1 | SDD10596.1 | SAMN04488239_101105 | SAMN04488239_105140 | Hypothetical protein. | Glycosyl transferase family 2. | 0.883 |
SDC05061.1 | SDE48210.1 | SAMN04488239_101105 | SAMN04488239_12062 | Hypothetical protein. | SNF2 family N-terminal domain-containing protein. | 0.957 |
SDD10596.1 | SDC05061.1 | SAMN04488239_105140 | SAMN04488239_101105 | Glycosyl transferase family 2. | Hypothetical protein. | 0.883 |
SDD10596.1 | SDD25675.1 | SAMN04488239_105140 | SAMN04488239_10642 | Glycosyl transferase family 2. | Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.877 |
SDD10596.1 | SDE32979.1 | SAMN04488239_105140 | SAMN04488239_11760 | Glycosyl transferase family 2. | Glutamate synthase (NADPH) large subunit. | 0.894 |
SDD10596.1 | SDE48210.1 | SAMN04488239_105140 | SAMN04488239_12062 | Glycosyl transferase family 2. | SNF2 family N-terminal domain-containing protein. | 0.971 |
SDD10596.1 | gpmI | SAMN04488239_105140 | SAMN04488239_11383 | Glycosyl transferase family 2. | Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | 0.933 |
SDD10596.1 | pgi | SAMN04488239_105140 | SAMN04488239_101195 | Glycosyl transferase family 2. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.946 |
SDD10596.1 | pgk | SAMN04488239_105140 | SAMN04488239_11071 | Glycosyl transferase family 2. | Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. | 0.960 |
SDD10596.1 | rplD | SAMN04488239_105140 | SAMN04488239_103422 | Glycosyl transferase family 2. | LSU ribosomal protein L4P; Forms part of the polypeptide exit tunnel. | 0.883 |
SDD10596.1 | tpiA | SAMN04488239_105140 | SAMN04488239_104247 | Glycosyl transferase family 2. | Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | 0.896 |
SDD10596.1 | tpiA-2 | SAMN04488239_105140 | SAMN04488239_11318 | Glycosyl transferase family 2. | Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | 0.896 |
SDD25675.1 | SDD10596.1 | SAMN04488239_10642 | SAMN04488239_105140 | Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Glycosyl transferase family 2. | 0.877 |
SDD25675.1 | SDE32979.1 | SAMN04488239_10642 | SAMN04488239_11760 | Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Glutamate synthase (NADPH) large subunit. | 0.724 |
SDD25675.1 | gpmI | SAMN04488239_10642 | SAMN04488239_11383 | Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | 0.558 |
SDD25675.1 | pgi | SAMN04488239_10642 | SAMN04488239_101195 | Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.901 |
SDD25675.1 | pgk | SAMN04488239_10642 | SAMN04488239_11071 | Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. | 0.996 |
SDD25675.1 | tpiA | SAMN04488239_10642 | SAMN04488239_104247 | Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | 0.986 |
SDD25675.1 | tpiA-2 | SAMN04488239_10642 | SAMN04488239_11318 | Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | 0.989 |
SDE32979.1 | SDD10596.1 | SAMN04488239_11760 | SAMN04488239_105140 | Glutamate synthase (NADPH) large subunit. | Glycosyl transferase family 2. | 0.894 |
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