STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD15549.1Nitrile hydratase. (204 aa)    
Predicted Functional Partners:
SDD15588.1
Nitrile hydratase; NHase catalyzes the hydration of various nitrile compounds to the corresponding amides; Belongs to the nitrile hydratase subunit beta family.
 
 
 0.999
SDD15626.1
Nitrile hydratase accessory protein.
 
  
 0.977
SDC71843.1
aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A; Belongs to the amidase family.
    
  0.924
SDC40012.1
Amidase.
    
  0.866
SDD11658.1
Amidase; Belongs to the amidase family.
    
  0.866
SDE49886.1
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; Belongs to the amidase family.
 
  
  0.856
SDC88769.1
Amidase.
 
  
  0.843
SDE34182.1
Amidase; Belongs to the amidase family.
 
  
  0.834
SDD51721.1
Mandelamide amidase; Belongs to the amidase family.
    
  0.760
SDD42400.1
Amidase; Belongs to the amidase family.
 
  
  0.678
Your Current Organism:
Ruegeria marina
NCBI taxonomy Id: 639004
Other names: CGMCC 1.9108, JCM 16262, R. marina, Ruegeria marina Huo et al. 2011, Ruegeria sp. ZH17, strain ZH17
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