STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD27139.1Glyoxylate reductase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (334 aa)    
Predicted Functional Partners:
SDD27193.1
Gluconate 5-dehydrogenase.
  
   0.709
SDD26981.1
Sugar lactone lactonase YvrE.
  
 
  0.690
SDE20539.1
Hydroxypyruvate reductase.
 
 0.687
SDC39848.1
Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+).
   
 0.685
SDD64997.1
Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+).
   
 0.685
SDD18588.1
Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
     
 0.647
SDD27093.1
Aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family.
  
 
  0.630
SDD27969.1
Glyoxylate/hydroxypyruvate reductase A.
 
  
 
0.629
SDC49118.1
Glyoxylate/hydroxypyruvate reductase A.
 
  
 
0.616
SDD26885.1
NADPH2:quinone reductase.
    
  0.595
Your Current Organism:
Ruegeria marina
NCBI taxonomy Id: 639004
Other names: CGMCC 1.9108, JCM 16262, R. marina, Ruegeria marina Huo et al. 2011, Ruegeria sp. ZH17, strain ZH17
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