STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE11461.1Acetyltransferase (GNAT) family protein. (157 aa)    
Predicted Functional Partners:
SDE11503.1
Glycine/D-amino acid oxidase.
       0.787
SDE31503.1
cob(I)yrinic acid a,c-diamide adenosyltransferase; Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids.
      0.581
SDE11546.1
tRNA U34 5-methylaminomethyl-2-thiouridine-forming methyltransferase MnmC.
       0.569
SDE11592.1
Permease of the drug/metabolite transporter (DMT) superfamily.
       0.569
SDD54852.1
Transcriptional regulator, XRE family with cupin sensor.
  
 
 0.528
SDC96132.1
Hypothetical protein.
  
     0.518
SDC75488.1
Protein of unknown function.
  
     0.497
SDC71287.1
Transcriptional regulator, XRE family with cupin sensor.
    
 0.439
SDE13719.1
Transcriptional regulator, XRE family with cupin sensor.
    
 0.439
SDC50826.1
tRNA threonylcarbamoyl adenosine modification protein YeaZ.
  
 
 0.430
Your Current Organism:
Ruegeria marina
NCBI taxonomy Id: 639004
Other names: CGMCC 1.9108, JCM 16262, R. marina, Ruegeria marina Huo et al. 2011, Ruegeria sp. ZH17, strain ZH17
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.