STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE28175.1Electron transfer flavoprotein alpha subunit apoprotein. (309 aa)    
Predicted Functional Partners:
SDC68567.1
Electron-transferring-flavoprotein dehydrogenase; Accepts electrons from ETF and reduces ubiquinone.
 
 0.999
SDE28214.1
Electron transfer flavoprotein beta subunit.
 0.999
SDD69022.1
2,4-dienoyl-CoA reductase.
  
 
 0.980
SDE46213.1
isovaleryl-CoA dehydrogenase.
 0.953
SDC41526.1
Hypothetical protein.
 0.948
SDC41908.1
acyl-CoA dehydrogenase.
 0.948
SDD77956.1
Hypothetical protein.
 0.946
SDC69389.1
Hypothetical protein.
 0.939
SDD44787.1
acyl-CoA dehydrogenase.
 0.931
SDD76820.1
Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
  
 0.929
Your Current Organism:
Ruegeria marina
NCBI taxonomy Id: 639004
Other names: CGMCC 1.9108, JCM 16262, R. marina, Ruegeria marina Huo et al. 2011, Ruegeria sp. ZH17, strain ZH17
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