Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDC41526.1 | SDC41908.1 | SAMN04488239_102219 | SAMN04488239_102227 | Hypothetical protein. | acyl-CoA dehydrogenase. | 0.498 |
SDC41526.1 | SDC68567.1 | SAMN04488239_102219 | SAMN04488239_103156 | Hypothetical protein. | Electron-transferring-flavoprotein dehydrogenase; Accepts electrons from ETF and reduces ubiquinone. | 0.537 |
SDC41526.1 | SDD76820.1 | SAMN04488239_102219 | SAMN04488239_11065 | Hypothetical protein. | Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | 0.404 |
SDC41526.1 | SDE28175.1 | SAMN04488239_102219 | SAMN04488239_116140 | Hypothetical protein. | Electron transfer flavoprotein alpha subunit apoprotein. | 0.948 |
SDC41526.1 | SDE28214.1 | SAMN04488239_102219 | SAMN04488239_116141 | Hypothetical protein. | Electron transfer flavoprotein beta subunit. | 0.898 |
SDC41908.1 | SDC41526.1 | SAMN04488239_102227 | SAMN04488239_102219 | acyl-CoA dehydrogenase. | Hypothetical protein. | 0.498 |
SDC41908.1 | SDC68567.1 | SAMN04488239_102227 | SAMN04488239_103156 | acyl-CoA dehydrogenase. | Electron-transferring-flavoprotein dehydrogenase; Accepts electrons from ETF and reduces ubiquinone. | 0.537 |
SDC41908.1 | SDD76820.1 | SAMN04488239_102227 | SAMN04488239_11065 | acyl-CoA dehydrogenase. | Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | 0.404 |
SDC41908.1 | SDE28175.1 | SAMN04488239_102227 | SAMN04488239_116140 | acyl-CoA dehydrogenase. | Electron transfer flavoprotein alpha subunit apoprotein. | 0.948 |
SDC41908.1 | SDE28214.1 | SAMN04488239_102227 | SAMN04488239_116141 | acyl-CoA dehydrogenase. | Electron transfer flavoprotein beta subunit. | 0.913 |
SDC68567.1 | SDC41526.1 | SAMN04488239_103156 | SAMN04488239_102219 | Electron-transferring-flavoprotein dehydrogenase; Accepts electrons from ETF and reduces ubiquinone. | Hypothetical protein. | 0.537 |
SDC68567.1 | SDC41908.1 | SAMN04488239_103156 | SAMN04488239_102227 | Electron-transferring-flavoprotein dehydrogenase; Accepts electrons from ETF and reduces ubiquinone. | acyl-CoA dehydrogenase. | 0.537 |
SDC68567.1 | SDC69389.1 | SAMN04488239_103156 | SAMN04488239_103175 | Electron-transferring-flavoprotein dehydrogenase; Accepts electrons from ETF and reduces ubiquinone. | Hypothetical protein. | 0.702 |
SDC68567.1 | SDD44787.1 | SAMN04488239_103156 | SAMN04488239_107158 | Electron-transferring-flavoprotein dehydrogenase; Accepts electrons from ETF and reduces ubiquinone. | acyl-CoA dehydrogenase. | 0.537 |
SDC68567.1 | SDD76820.1 | SAMN04488239_103156 | SAMN04488239_11065 | Electron-transferring-flavoprotein dehydrogenase; Accepts electrons from ETF and reduces ubiquinone. | Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | 0.403 |
SDC68567.1 | SDD77956.1 | SAMN04488239_103156 | SAMN04488239_11091 | Electron-transferring-flavoprotein dehydrogenase; Accepts electrons from ETF and reduces ubiquinone. | Hypothetical protein. | 0.590 |
SDC68567.1 | SDE28175.1 | SAMN04488239_103156 | SAMN04488239_116140 | Electron-transferring-flavoprotein dehydrogenase; Accepts electrons from ETF and reduces ubiquinone. | Electron transfer flavoprotein alpha subunit apoprotein. | 0.999 |
SDC68567.1 | SDE28214.1 | SAMN04488239_103156 | SAMN04488239_116141 | Electron-transferring-flavoprotein dehydrogenase; Accepts electrons from ETF and reduces ubiquinone. | Electron transfer flavoprotein beta subunit. | 0.999 |
SDC68567.1 | SDE46213.1 | SAMN04488239_103156 | SAMN04488239_12014 | Electron-transferring-flavoprotein dehydrogenase; Accepts electrons from ETF and reduces ubiquinone. | isovaleryl-CoA dehydrogenase. | 0.625 |
SDC69389.1 | SDC68567.1 | SAMN04488239_103175 | SAMN04488239_103156 | Hypothetical protein. | Electron-transferring-flavoprotein dehydrogenase; Accepts electrons from ETF and reduces ubiquinone. | 0.702 |
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