STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE35014.1Hypothetical protein. (461 aa)    
Predicted Functional Partners:
SDE74118.1
Signal transduction histidine kinase.
 
 0.997
SDE74154.1
Hpt domain-containing protein.
  
 0.997
SDD76820.1
Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
   
 0.973
SDE13372.1
Hypothetical protein.
 
 0.965
SDE12486.1
PAS/PAC sensor hybrid histidine kinase.
 
 
0.942
SDC72097.1
Two component transcriptional regulator, winged helix family.
 
 0.932
SDD51557.1
Response regulator receiver modulated diguanylate cyclase.
 
 0.870
SDC41386.1
Branched-chain alpha-keto acid dehydrogenase E1 component.
   
 0.869
SDD10844.1
Response regulator receiver domain-containing protein.
 
 0.854
SDC07159.1
Two component transcriptional regulator, winged helix family.
 
 0.846
Your Current Organism:
Ruegeria marina
NCBI taxonomy Id: 639004
Other names: CGMCC 1.9108, JCM 16262, R. marina, Ruegeria marina Huo et al. 2011, Ruegeria sp. ZH17, strain ZH17
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.