STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE46138.1Phosphoglycolate phosphatase. (220 aa)    
Predicted Functional Partners:
SDC49118.1
Glyoxylate/hydroxypyruvate reductase A.
    
 0.844
SDC74356.1
Glycolate oxidase iron-sulfur subunit.
    
 0.843
SDC74262.1
Glycolate oxidase.
    
 0.842
SDC74306.1
Glycolate oxidase FAD binding subunit.
    
 0.842
SDC99115.1
Glyoxylate reductase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
  0.841
SDC78594.1
Phosphoglycolate phosphatase.
  
  
 
0.812
SDD51473.1
Phosphoglycolate phosphatase.
  
  
 
0.810
SDD07064.1
Lactate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
  0.742
SDD46760.1
Gluconate 2-dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
  0.742
SDD63494.1
Hypothetical protein.
 
  
 0.716
Your Current Organism:
Ruegeria marina
NCBI taxonomy Id: 639004
Other names: CGMCC 1.9108, JCM 16262, R. marina, Ruegeria marina Huo et al. 2011, Ruegeria sp. ZH17, strain ZH17
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.