Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BAI79823.1 | BAI79824.1 | DEFDS_0322 | DEFDS_0323 | Conserved hypothetical protein. | Hypothetical protein. | 0.800 |
BAI79823.1 | BAI79825.1 | DEFDS_0322 | DEFDS_0324 | Conserved hypothetical protein. | Metal dependent phosphohydrolase. | 0.759 |
BAI79823.1 | BAI79826.1 | DEFDS_0322 | DEFDS_0325 | Conserved hypothetical protein. | Hypothetical protein. | 0.795 |
BAI79823.1 | hemE | DEFDS_0322 | DEFDS_0318 | Conserved hypothetical protein. | Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. | 0.785 |
BAI79823.1 | hemH | DEFDS_0322 | DEFDS_0319 | Conserved hypothetical protein. | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. | 0.785 |
BAI79823.1 | ubiA | DEFDS_0322 | DEFDS_0320 | Conserved hypothetical protein. | 4-hydroxybenzoate polyprenyltransferase; Belongs to the UbiA prenyltransferase family. | 0.784 |
BAI79823.1 | ubiX | DEFDS_0322 | DEFDS_0321 | Conserved hypothetical protein. | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. | 0.784 |
BAI79824.1 | BAI79823.1 | DEFDS_0323 | DEFDS_0322 | Hypothetical protein. | Conserved hypothetical protein. | 0.800 |
BAI79824.1 | BAI79825.1 | DEFDS_0323 | DEFDS_0324 | Hypothetical protein. | Metal dependent phosphohydrolase. | 0.786 |
BAI79824.1 | BAI79826.1 | DEFDS_0323 | DEFDS_0325 | Hypothetical protein. | Hypothetical protein. | 0.820 |
BAI79824.1 | hemE | DEFDS_0323 | DEFDS_0318 | Hypothetical protein. | Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. | 0.765 |
BAI79824.1 | hemH | DEFDS_0323 | DEFDS_0319 | Hypothetical protein. | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. | 0.765 |
BAI79824.1 | ubiA | DEFDS_0323 | DEFDS_0320 | Hypothetical protein. | 4-hydroxybenzoate polyprenyltransferase; Belongs to the UbiA prenyltransferase family. | 0.759 |
BAI79824.1 | ubiX | DEFDS_0323 | DEFDS_0321 | Hypothetical protein. | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. | 0.759 |
BAI79825.1 | BAI79823.1 | DEFDS_0324 | DEFDS_0322 | Metal dependent phosphohydrolase. | Conserved hypothetical protein. | 0.759 |
BAI79825.1 | BAI79824.1 | DEFDS_0324 | DEFDS_0323 | Metal dependent phosphohydrolase. | Hypothetical protein. | 0.786 |
BAI79825.1 | BAI79826.1 | DEFDS_0324 | DEFDS_0325 | Metal dependent phosphohydrolase. | Hypothetical protein. | 0.784 |
BAI79825.1 | BAI80219.1 | DEFDS_0324 | DEFDS_0740 | Metal dependent phosphohydrolase. | Signal transduction response regulator. | 0.611 |
BAI79825.1 | BAI80623.1 | DEFDS_0324 | DEFDS_1154 | Metal dependent phosphohydrolase. | Putative signal transduction protein (GGDEF). | 0.674 |
BAI79825.1 | flgI | DEFDS_0324 | DEFDS_2149 | Metal dependent phosphohydrolase. | Flagellar P-ring protein FlgI; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. | 0.522 |
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