STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAI81095.1Conserved hypothetical protein. (512 aa)    
Predicted Functional Partners:
BAI81094.1
Conserved hypothetical protein.
       0.773
DEFDS_1637
NAD_synthase domain-containing protein; Probable gene remnant. Similar to the N-terminal region of Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) anaerobic ribonucleoside triphosphate reductase (695 aa). Csac_0774.
  
    0.729
ubiD
3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiD; Belongs to the UbiD family.
       0.425
BAI81096.1
Conserved hypothetical protein; Belongs to the LarC family.
       0.422
nth
Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.
       0.422
ubiE
Ubiquinone/menaquinone biosynthesis methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2).
  
    0.410
Your Current Organism:
Deferribacter desulfuricans
NCBI taxonomy Id: 639282
Other names: D. desulfuricans SSM1, Deferribacter desulfuricans SSM1, Deferribacter desulfuricans str. SSM1, Deferribacter desulfuricans strain SSM1
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.