Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BAI81096.1 | BAI81100.1 | DEFDS_1640 | DEFDS_1644 | Conserved hypothetical protein; Belongs to the LarC family. | Conserved hypothetical protein. | 0.618 |
BAI81096.1 | BAI81101.1 | DEFDS_1640 | DEFDS_1645 | Conserved hypothetical protein; Belongs to the LarC family. | Conserved hypothetical protein. | 0.618 |
BAI81096.1 | BAI81102.1 | DEFDS_1640 | DEFDS_1646 | Conserved hypothetical protein; Belongs to the LarC family. | Conserved hypothetical protein. | 0.618 |
BAI81096.1 | BAI81103.1 | DEFDS_1640 | DEFDS_1647 | Conserved hypothetical protein; Belongs to the LarC family. | Two-component response regulator. | 0.618 |
BAI81096.1 | BAI81104.1 | DEFDS_1640 | DEFDS_1648 | Conserved hypothetical protein; Belongs to the LarC family. | Hypothetical protein. | 0.618 |
BAI81096.1 | BAI81105.1 | DEFDS_1640 | DEFDS_1649 | Conserved hypothetical protein; Belongs to the LarC family. | Hypothetical protein. | 0.618 |
BAI81096.1 | BAI81106.1 | DEFDS_1640 | DEFDS_1650 | Conserved hypothetical protein; Belongs to the LarC family. | Pyrimidine 5'-nucleotidase. | 0.462 |
BAI81096.1 | nth | DEFDS_1640 | DEFDS_1641 | Conserved hypothetical protein; Belongs to the LarC family. | Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.816 |
BAI81096.1 | ubiD | DEFDS_1640 | DEFDS_1642 | Conserved hypothetical protein; Belongs to the LarC family. | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiD; Belongs to the UbiD family. | 0.816 |
BAI81096.1 | ubiE | DEFDS_1640 | DEFDS_1643 | Conserved hypothetical protein; Belongs to the LarC family. | Ubiquinone/menaquinone biosynthesis methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2). | 0.735 |
BAI81100.1 | BAI81096.1 | DEFDS_1644 | DEFDS_1640 | Conserved hypothetical protein. | Conserved hypothetical protein; Belongs to the LarC family. | 0.618 |
BAI81100.1 | BAI81101.1 | DEFDS_1644 | DEFDS_1645 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.857 |
BAI81100.1 | BAI81102.1 | DEFDS_1644 | DEFDS_1646 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.773 |
BAI81100.1 | BAI81103.1 | DEFDS_1644 | DEFDS_1647 | Conserved hypothetical protein. | Two-component response regulator. | 0.823 |
BAI81100.1 | BAI81104.1 | DEFDS_1644 | DEFDS_1648 | Conserved hypothetical protein. | Hypothetical protein. | 0.773 |
BAI81100.1 | BAI81105.1 | DEFDS_1644 | DEFDS_1649 | Conserved hypothetical protein. | Hypothetical protein. | 0.773 |
BAI81100.1 | BAI81106.1 | DEFDS_1644 | DEFDS_1650 | Conserved hypothetical protein. | Pyrimidine 5'-nucleotidase. | 0.568 |
BAI81100.1 | nth | DEFDS_1644 | DEFDS_1641 | Conserved hypothetical protein. | Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.658 |
BAI81100.1 | ubiD | DEFDS_1644 | DEFDS_1642 | Conserved hypothetical protein. | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiD; Belongs to the UbiD family. | 0.689 |
BAI81100.1 | ubiE | DEFDS_1644 | DEFDS_1643 | Conserved hypothetical protein. | Ubiquinone/menaquinone biosynthesis methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2). | 0.755 |
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