STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snov_0681L-lactate transport; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family. (565 aa)    
Predicted Functional Partners:
Snov_0680
KEGG: azc:AZC_2267 L-lactate dehydrogenase; PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase.
 
  
 0.831
Snov_0682
GntR domain protein; KEGG: rru:Rru_A1414 GntR family transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH.
  
 0.717
Snov_2529
PFAM: FAD linked oxidase domain protein; KEGG: bra:BRADO5280 bifunctional protein.
  
  
 0.667
Snov_3378
L-lactate dehydrogenase (cytochrome); KEGG: sme:SMa0404 FMN-dependent dehydrogenase; PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase.
 
  
 0.588
Snov_4068
(S)-mandelate dehydrogenase; KEGG: pde:Pden_5045 (S)-2-hydroxy-acid oxidase; PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase.
 
  
 0.575
Snov_1916
PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: mrd:Mrad2831_3410 L-lactate dehydrogenase (cytochrome).
 
  
 0.572
Snov_2512
PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: avn:Avin_12350 L-lactate dehydrogenase/FMN-dependent alpha-hydroxy acid dehydrogenase.
 
  
 0.572
Snov_3894
PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: azc:AZC_0080 glycolate oxidase.
 
  
 0.570
mdh
Malate dehydrogenase, NAD-dependent; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.
  
  
 0.481
Snov_2033
Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
   
  
 0.462
Your Current Organism:
Starkeya novella
NCBI taxonomy Id: 639283
Other names: S. novella DSM 506, Starkeya novella DSM 506, Starkeya novella IAM 12100, Starkeya novella str. DSM 506, Starkeya novella strain DSM 506
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.