STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snov_2253KEGG: mno:Mnod_5539 hypothetical protein. (350 aa)    
Predicted Functional Partners:
Snov_2252
Multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-4 domain protein; PAS fold domain protein; histidine kinase A domain protein; response regulator receiver; KEGG: bra:BRADO5023 two-component sensor histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; response regulator receiver.
 
     0.607
Snov_2339
Trehalose-phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
   
    0.576
Snov_2587
KEGG: bja:blr2202 hypothetical protein.
  
     0.556
Snov_0583
PFAM: Invasion associated locus B family protein; KEGG: xau:Xaut_4649 invasion associated locus B family protein.
 
     0.544
Snov_2029
PFAM: Protein of unknown function DUF2327; KEGG: mes:Meso_1118 hypothetical protein.
  
     0.527
Snov_1410
KEGG: xau:Xaut_1636 hypothetical protein.
  
     0.513
Snov_2261
PFAM: Apolipoprotein A1/A4/E; KEGG: rpe:RPE_1474 hypothetical protein.
 
     0.478
Snov_1699
PFAM: Invasion associated locus B family protein; KEGG: xau:Xaut_3868 invasion associated locus B family protein.
 
     0.444
Snov_2595
KEGG: rpd:RPD_3683 hypothetical protein.
  
     0.441
Snov_0329
PFAM: regulatory protein TetR; KEGG: mch:Mchl_0328 transcriptional regulator, TetR family.
  
     0.430
Your Current Organism:
Starkeya novella
NCBI taxonomy Id: 639283
Other names: S. novella DSM 506, Starkeya novella DSM 506, Starkeya novella IAM 12100, Starkeya novella str. DSM 506, Starkeya novella strain DSM 506
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.