STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snov_2508KEGG: xau:Xaut_1316 phosphonate metabolism PhnG; TIGRFAM: phosphonate C-P lyase system protein PhnG; PFAM: phosphonate metabolism PhnG. (158 aa)    
Predicted Functional Partners:
Snov_2503
TIGRFAM: phosphonate C-P lyase system protein PhnL; PFAM: ABC transporter related; KEGG: azc:AZC_3398 ATP-binding component phosphonate transport; SMART: AAA ATPase.
 
 0.999
Snov_2506
PFAM: phosphonate metabolism; KEGG: xau:Xaut_1314 phosphonate metabolism.
 
 0.999
Snov_2507
Phosphonate C-P lyase system protein PhnH; KEGG: azc:AZC_3393 putative phosphonate metabolism protein; TIGRFAM: phosphonate C-P lyase system protein PhnH; PFAM: phosphonate metabolism.
 
 0.999
Snov_2504
TIGRFAM: phosphonate C-P lyase system protein PhnK; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: azc:AZC_3397 phosphonate C-P lyase system protein PhnK; SMART: AAA ATPase.
 
 
 0.998
Snov_2505
PFAM: phosphonate metabolism PhnJ; KEGG: azc:AZC_3395 putative C-P (carbon-phosphorus) lyase component protein.
 
 
 0.998
Snov_2502
KEGG: xau:Xaut_1310 phosphonate metabolism protein PhnM; TIGRFAM: phosphonate metabolism protein PhnM; PFAM: amidohydrolase.
 
 
 0.994
Snov_1000
KEGG: rce:RC1_0525 phosphonate metabolism protein PhnM; TIGRFAM: phosphonate metabolism protein PhnM; PFAM: amidohydrolase.
 
 
 0.987
Snov_3936
Phosphonate metabolism protein PhnM; KEGG: azc:AZC_0703 metal-dependent hydrolase; TIGRFAM: phosphonate metabolism protein PhnM; PFAM: amidohydrolase.
 
 
 0.987
Snov_2509
Transcriptional regulator, GntR family; TIGRFAM: phosphonates metabolism transcriptional regulator PhnF; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; KEGG: azc:AZC_3391 regulatory protein; SMART: regulatory protein GntR HTH.
 
  
 0.967
phnN
Phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN; Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP).
 
  
 0.966
Your Current Organism:
Starkeya novella
NCBI taxonomy Id: 639283
Other names: S. novella DSM 506, Starkeya novella DSM 506, Starkeya novella IAM 12100, Starkeya novella str. DSM 506, Starkeya novella strain DSM 506
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