STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snov_2985TIGRFAM: 2-hydroxy-3-oxopropionate reductase; KEGG: xau:Xaut_2369 2-hydroxy-3-oxopropionate reductase; PFAM: 6-phosphogluconate dehydrogenase NAD-binding. (296 aa)    
Predicted Functional Partners:
Snov_2984
TIGRFAM: hydroxypyruvate isomerase; KEGG: oca:OCAR_6561 hydroxypyruvate isomerase; PFAM: Xylose isomerase domain protein TIM barrel; Belongs to the hyi family.
 
 0.980
Snov_2983
KEGG: azc:AZC_3488 glyoxylate carboligase; TIGRFAM: glyoxylate carboligase; PFAM: thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein domain protein TPP-binding; Belongs to the TPP enzyme family.
 
 
 0.979
Snov_1922
KEGG: mrd:Mrad2831_3407 hydroxypyruvate isomerase; PFAM: Xylose isomerase domain protein TIM barrel; Belongs to the hyi family.
 
 0.945
Snov_3108
KEGG: mrd:Mrad2831_0126 hydroxypyruvate reductase; PFAM: MOFRL domain protein.
 
  
 0.917
Snov_1745
KEGG: met:M446_3126 2-hydroxy-3-oxopropionate reductase; PFAM: 6-phosphogluconate dehydrogenase NAD-binding.
  
  
 
0.910
Snov_0241
KEGG: xau:Xaut_4126 glyoxylate reductase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region.
    
 0.902
Snov_4156
PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: pst:PSPTO_0258 D-isomer specific 2-hydroxyacid dehydrogenase family protein.
    
  0.901
Snov_0427
Fructose-bisphosphate aldolase, class II, Calvin cycle subtype; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis.
 
    0.642
Snov_1647
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: azc:AZC_1544 putative enoyl-CoA hydratase.
 
  
 0.618
Snov_3865
PFAM: Carboxymuconolactone decarboxylase; KEGG: esa:ESA_00713 hypothetical protein.
  
  
 0.422
Your Current Organism:
Starkeya novella
NCBI taxonomy Id: 639283
Other names: S. novella DSM 506, Starkeya novella DSM 506, Starkeya novella IAM 12100, Starkeya novella str. DSM 506, Starkeya novella strain DSM 506
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