STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snov_3015PFAM: plasmid maintenance system killer; KEGG: azc:AZC_4646 putative plasmid maintenance system killer protein. (93 aa)    
Predicted Functional Partners:
Snov_3014
TIGRFAM: addiction module antidote protein, HigA family; KEGG: rpt:Rpal_3616 plasmid maintenance system antidote protein, XRE family.
 
 
 0.997
Snov_3013
PFAM: protein of unknown function DUF6 transmembrane; KEGG: rlt:Rleg2_3005 protein of unknown function DUF6 transmembrane.
       0.570
Snov_3016
PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: azc:AZC_1173 iron-sulfur cluster-binding protein 1.
       0.511
Snov_3017
PFAM: Oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; ferredoxin; KEGG: azc:AZC_1174 iron-sulfur cluster-binding protein 2.
       0.511
Your Current Organism:
Starkeya novella
NCBI taxonomy Id: 639283
Other names: S. novella DSM 506, Starkeya novella DSM 506, Starkeya novella IAM 12100, Starkeya novella str. DSM 506, Starkeya novella strain DSM 506
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.