STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snov_3466Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: azc:AZC_4120 putative transcription regulator; Belongs to the LysR transcriptional regulatory family. (306 aa)    
Predicted Functional Partners:
Snov_4257
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: oan:Oant_4516 LysR family transcriptional regulator.
  
     0.703
Snov_1216
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: xau:Xaut_2757 LysR family transcriptional regulator.
  
     0.661
Snov_1244
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bpy:Bphyt_4124 transcriptional regulator, LysR family.
  
     0.657
Snov_0244
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bja:blr5260 transcriptional regulatory protein.
  
     0.646
Snov_1729
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rle:pRL90211 LysR family transcriptional regulator.
  
     0.638
Snov_4171
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pfl:PFL_4489 LysR family transcriptional regulator.
  
     0.629
Snov_3052
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: cak:Caul_4617 LysR family transcriptional regulator.
  
     0.612
Snov_0418
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: acr:Acry_2830 LysR family transcriptional regulator.
  
     0.607
Snov_4152
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ppg:PputGB1_3104 LysR family transcriptional regulator.
  
     0.590
Snov_0196
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: jan:Jann_2940 LysR family transcriptional regulator.
  
     0.584
Your Current Organism:
Starkeya novella
NCBI taxonomy Id: 639283
Other names: S. novella DSM 506, Starkeya novella DSM 506, Starkeya novella IAM 12100, Starkeya novella str. DSM 506, Starkeya novella strain DSM 506
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