STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snov_3743PFAM: protein of unknown function DUF344; KEGG: gbe:GbCGDNIH1_1622 polyphosphate kinase. (306 aa)    
Predicted Functional Partners:
ppk
Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.
 
  
 0.937
Snov_4037
PFAM: protein of unknown function DUF344; KEGG: mes:Meso_0013 hypothetical protein.
  
  
 
0.909
ppa
Inorganic diphosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.
    
 0.906
Snov_1535
PFAM: protein of unknown function DUF344; KEGG: xau:Xaut_2307 hypothetical protein.
  
  
 
0.904
Snov_1117
PFAM: Ppx/GppA phosphatase; KEGG: xau:Xaut_3126 Ppx/GppA phosphatase.
 
 
 0.665
Snov_2814
PFAM: OmpW family protein; KEGG: mlo:mll6127 outer membrane protein.
   
    0.585
Snov_4468
TIGRFAM: cytochrome c oxidase accessory protein CcoG; KEGG: xau:Xaut_0463 cytochrome c oxidase cbb3 type accessory protein FixG.
   
    0.573
Snov_3744
KEGG: mno:Mnod_0075 biotin carboxylase.
       0.527
Snov_3745
KEGG: bpt:Bpet2397 hypothetical protein.
       0.527
Snov_3742
PFAM: phosphoribosyltransferase; KEGG: aeh:Mlg_1733 phosphoribosyltransferase.
       0.437
Your Current Organism:
Starkeya novella
NCBI taxonomy Id: 639283
Other names: S. novella DSM 506, Starkeya novella DSM 506, Starkeya novella IAM 12100, Starkeya novella str. DSM 506, Starkeya novella strain DSM 506
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.