STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snov_4174PFAM: flavin reductase domain protein FMN-binding; KEGG: xau:Xaut_1212 flavin reductase domain-containing protein. (173 aa)    
Predicted Functional Partners:
Snov_4173
PFAM: flavin reductase domain protein FMN-binding; KEGG: psa:PST_3602 NAD(P)H-flavin oxidoreductase.
 
    
0.711
Snov_4172
KEGG: msm:MSMEG_6734 dibenzothiophene desulfurization enzyme A.
  
  
 0.611
Snov_0210
PFAM: Acyl-CoA dehydrogenase type 2 domain; KEGG: bja:bll6096 putative pigment protein.
 
  
 0.513
Your Current Organism:
Starkeya novella
NCBI taxonomy Id: 639283
Other names: S. novella DSM 506, Starkeya novella DSM 506, Starkeya novella IAM 12100, Starkeya novella str. DSM 506, Starkeya novella strain DSM 506
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.