Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Dsui_0450 | Dsui_0454 | Dsui_0450 | Dsui_0454 | MAF protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | Hypothetical protein. | 0.771 |
Dsui_0450 | Dsui_0455 | Dsui_0450 | Dsui_0455 | MAF protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | Putative integral membrane protein. | 0.787 |
Dsui_0450 | Dsui_0457 | Dsui_0450 | Dsui_0457 | MAF protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | PFAM: Protein of unknown function (DUF2782). | 0.555 |
Dsui_0450 | Dsui_0458 | Dsui_0450 | Dsui_0458 | MAF protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | TIGR00730 family protein; PFAM: Possible lysine decarboxylase; TIGRFAM: TIGR00725 family protein; TIGR00730 family protein; Belongs to the LOG family. | 0.513 |
Dsui_0450 | nadD | Dsui_0450 | Dsui_0453 | MAF protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | Nicotinate/nicotinamide nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.814 |
Dsui_0450 | rlmH | Dsui_0450 | Dsui_0451 | MAF protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | Hypothetical protein; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family. | 0.814 |
Dsui_0450 | rsfS | Dsui_0450 | Dsui_0452 | MAF protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | Iojap-like ribosome-associated protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation. | 0.820 |
Dsui_0450 | thrB | Dsui_0450 | Dsui_0456 | MAF protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | Homoserine kinase, Neisseria type; PFAM: Phosphotransferase enzyme family; TIGRFAM: homoserine kinase, Neisseria type; Belongs to the pseudomonas-type ThrB family. | 0.551 |
Dsui_0454 | Dsui_0450 | Dsui_0454 | Dsui_0450 | Hypothetical protein. | MAF protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | 0.771 |
Dsui_0454 | Dsui_0455 | Dsui_0454 | Dsui_0455 | Hypothetical protein. | Putative integral membrane protein. | 0.842 |
Dsui_0454 | Dsui_0457 | Dsui_0454 | Dsui_0457 | Hypothetical protein. | PFAM: Protein of unknown function (DUF2782). | 0.578 |
Dsui_0454 | Dsui_0458 | Dsui_0454 | Dsui_0458 | Hypothetical protein. | TIGR00730 family protein; PFAM: Possible lysine decarboxylase; TIGRFAM: TIGR00725 family protein; TIGR00730 family protein; Belongs to the LOG family. | 0.467 |
Dsui_0454 | nadD | Dsui_0454 | Dsui_0453 | Hypothetical protein. | Nicotinate/nicotinamide nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.837 |
Dsui_0454 | polA | Dsui_0454 | Dsui_0459 | Hypothetical protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.476 |
Dsui_0454 | rlmH | Dsui_0454 | Dsui_0451 | Hypothetical protein. | Hypothetical protein; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family. | 0.816 |
Dsui_0454 | rsfS | Dsui_0454 | Dsui_0452 | Hypothetical protein. | Iojap-like ribosome-associated protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation. | 0.837 |
Dsui_0454 | thrB | Dsui_0454 | Dsui_0456 | Hypothetical protein. | Homoserine kinase, Neisseria type; PFAM: Phosphotransferase enzyme family; TIGRFAM: homoserine kinase, Neisseria type; Belongs to the pseudomonas-type ThrB family. | 0.612 |
Dsui_0455 | Dsui_0450 | Dsui_0455 | Dsui_0450 | Putative integral membrane protein. | MAF protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | 0.787 |
Dsui_0455 | Dsui_0454 | Dsui_0455 | Dsui_0454 | Putative integral membrane protein. | Hypothetical protein. | 0.842 |
Dsui_0455 | Dsui_0457 | Dsui_0455 | Dsui_0457 | Putative integral membrane protein. | PFAM: Protein of unknown function (DUF2782). | 0.716 |
page 1 of 5